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    False positive reduction in protein-protein interaction predictions using gene ontology annotations. 

    Type: Journal Paper
    Author : محمود اخوان مهدوی; Yen-Han Lin; Mahmood Akhavan Mahdavi
    Year: 2007
    Abstract:

    Background: Many crucial cellular operations such as metabolism, signalling, and regulations are based on protein-protein interactions. However, the lack of robust protein-protein interaction information is a challenge. ...

    Prediction of protein-protein interactions using protein signature profiling. 

    Type: Journal Paper
    Author : محمود اخوان مهدوی; Yen-Han Lin; Mahmood Akhavan Mahdavi
    Year: 2007
    Abstract:

    Protein domains are conserved and functionally independent structures that play an important role in interactions among related proteins. Domain-domain interactions have been recently used to predict protein-protein ...

    Metabolic Organization of Caenorhabditis elegans 

    Type: Conference Paper
    Author : محمود اخوان مهدوی; Yen-Han Lin; Mahmood Akhavan Mahdavi
    Year: 2005
    Abstract:

    Metabolic bionetwork of Caenorhabditis elegans has been reconstructed using genome information retrieved from KEGG (Kyoto Encyclopedia of Genomes and Genes, Release 32) database. The reconstructed bionetwork contains 103 ...

    Metabolic pathway reconstruction of C. elegans from genome database 

    Type: Conference Paper
    Author : محمود اخوان مهدوی; Yen-Han Lin; Mahmood Akhavan Mahdavi
    Year: 2004
    Abstract:

    C. elegans has over 7000 genes in common with the human genome. Many biological processes inside human genome are similar to that in C. elegans, making it a promising ‘candidate’ for studying human-related diseases. with ...

    Function inference for interacting proteins through protein signatures 

    Type: Conference Paper
    Author : محمود اخوان مهدوی; Yen-Han Lin; Mahmood Akhavan Mahdavi
    Year: 2007
    Abstract:

    Abstract

    Signatures are functional sub-units of proteins’ primary structures. They include domains, motifs, and binding sites. Signatures play an important role in determining the interactions web of a particular ...

    Prediction of protein-protein interactions using signature profiling 

    Type: Conference Paper
    Author : محمود اخوان مهدوی; Yen-Han Lin; Mahmood Akhavan Mahdavi
    Year: 2006
    Abstract:

    Protein-protein interaction is the key element of cellular activities. Proteins interact with each other through functional units such as domains, binding sites, etc which are collectively called signatures. Signatures are ...

    Kinetic modeling for redox potential-controlled repeated batch ethanol fermentation using flocculating yeast 

    Type: Journal Paper
    Author : Chen-Guang Liu; Li-Yang Liu; Yen-Han Lin; Feng-Wu Bai
    Year: 2015
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